A self-hosted "second brain": Khoj indexes your own files and answers questions from them, parsing Markdown (whole Obsidian vaults included), org-mode, PDF, Word, plain text, Notion pages, GitHub repositories, and images described by a vision model, then embedding everything with sentence-transformers into a vector index for semantic search and RAG with cited sources. Any LLM backend works: local models like Llama, Qwen, or Mistral via Ollama, or cloud models like GPT, Claude, and Gemini. You can build custom agents, each with its own persona, scoped knowledge base, chat model, and tools such as web search and code execution. Scheduled automations run recurring research and deliver newsletters or notifications to your inbox, and research mode performs multi-hop web searches with inline citations. Access it from a browser, the Obsidian plugin, Emacs, desktop, or WhatsApp - all clients connect to the same self-hosted instance, making Khoj one of the few AI assistants Emacs users can point at decades of org files. Semantic search means recall works without exact keywords: "that paper about forecasting with transformers" surfaces the right PDF even when you cannot remember its title. Switching LLM backends never requires re-indexing your documents, and with a local model via Ollama, even inference stays on hardware you control - journals, research, and private notes are never sent anywhere. Python/FastAPI stack, AGPL-licensed, with PostgreSQL storage.

The most feature-complete open-source alternative to Google's NotebookLM — a self-hosted research platform where you upload PDFs, videos, audio files, and web pages into organized notebooks, then chat with your content, generate multi-speaker podcasts, and run semantic search across everything without sending a single byte to Google's servers. The podcast engine supports 1-4 fully customizable speakers with backstories, personalities, and expertise profiles, generating professional audio dialogue through OpenAI, ElevenLabs, Google TTS, or completely local text-to-speech via Kokoro for maximum privacy. Content processing uses token-based chunking with RAG-powered retrieval grounded in your uploaded sources, while both full-text keyword search and semantic vector search via SurrealDB enable conceptual discovery across all notebooks. The 18+ supported AI providers include OpenAI, Anthropic, Google Gemini, Groq, Ollama, LM Studio, and more — configurable per task so you can route cheap models to summarization and powerful models to analysis. Content transformations extract insights, generate summaries, create study guides, and produce structured outputs from any source material. The MCP integration connects Open Notebook to Claude Desktop, VS Code, and other MCP clients for seamless workflow integration. A full REST API on port 5055 enables complete automation of notebook management, source upload, and podcast generation. Deploy via Docker Compose with the application container, SurrealDB v2 on RocksDB, and optional TTS containers. Running on a dedicated VPS on RepoCloud with guaranteed CPU, RAM, and SSD, full root SSH access, and a browser serial console. MIT licensed.

Chat with your own documents: AnythingLLM, from Mintplex Labs, wraps retrieval-augmented generation (RAG) in an open-source application anyone can run. You organize content into workspaces, each an isolated namespace with its own documents, vector embeddings, chat history, and settings, so one instance can hold several separate knowledge bases. Upload PDFs, DOCX, TXT, and other formats, or scrape web pages; the built-in collector parses and chunks them into a vector database (LanceDB by default, with Pinecone, Chroma, Qdrant, and others supported). Answers cite their source documents. It works with both cloud LLMs (OpenAI, Anthropic, Gemini) and local ones via Ollama or LM Studio, and the embedding model is separately configurable. Beyond RAG chat, it includes AI agents that can browse the web and run tools, an embeddable chat widget for your website, a developer API, and multi-user mode with admin, manager, and default roles plus per-workspace access control. Context assembly is smarter than naive RAG: pinned documents, attached files, vector search hits, and recent chat history are combined under a token budget so the model's context window is filled efficiently, and each workspace supports multiple independent conversation threads against the same knowledge base. Because the embedding model, vector store, and chat LLM are all independently swappable, you can move between providers without re-ingesting a single document. The stack is Node.js with a React frontend, MIT-licensed.

WeKnora turns scattered corporate documents into a searchable, reasoning-capable knowledge asset that your team can query in plain language and receive cited, sourced answers. Upload PDFs, Word files, web pages, Feishu wikis, Notion databases, Yuque docs, GitLab repositories, or RSS feeds into structured knowledge bases, and three distinct modes make the content actionable: RAG Quick Q&A retrieves relevant chunks and generates answers with source citations; the ReAct Agent autonomously orchestrates multi-step reasoning across knowledge retrieval, MCP tool calls, web search, and sandboxed code execution to produce comprehensive research reports; and Wiki Mode deploys LLM agents to distill raw documents into an interlinked markdown knowledge base with an interactive knowledge graph, revision history, and one-click rollback. Connect 20+ LLM providers including OpenAI, DeepSeek, Qwen, Claude, and local Ollama models without vendor lock-in, and choose from seven vector database backends (Qdrant, Milvus, Weaviate, and more) for embedding storage. Enterprise features include four-tier RBAC with per-resource ownership and per-workspace audit logs, AES-256-GCM credential encryption, scoped API keys, Langfuse observability tracing for every agent loop and tool call, and a runtime task-queue dashboard for worker-pool governance. Cross-session long-term memory preserves conversational context across interactions. The Agent Skills catalog lets teams install and share sandboxed scripts executed in Docker or E2B containers. A Chrome Extension captures web content directly into knowledge bases. Running on a dedicated VPS on RepoCloud with guaranteed CPU, RAM, and SSD, full root SSH access, and a browser serial console. MIT licensed.

In seven wizard steps, PandaWiki sets up a product docs, manual, FAQ, or blog site whose built-in AI answers visitors using only your own content. Those visitors can chat with an assistant that cites its sources and accepts image questions, or switch to a docs-only search that lists ranked pages with summaries. Publishing stays under control: each document has three switches, visible in navigation, reachable by URL, and answerable by AI, and nothing appears or gets learned until it is published. Authors write in a Markdown and HTML editor, or import from URLs, RSS and Atom feeds, sitemaps, offline .txt, .md, .xlsx, .docx, and .pdf files, Notion, Yuque, SiYuan, Wiki.js, Feishu, Confluence, and DingTalk. Pages export to Word, PDF, or Markdown. The wizard covers models, domain, HTTP or HTTPS ports, import, publishing, answer testing, and page decoration. One knowledge base can also feed a web widget and DingTalk, Feishu, WeCom, and Discord bots. Administrators get a dashboard of visits, questions, visitor regions, hot documents, and referring domains. Chat models come from Baizhi Cloud, DeepSeek, OpenAI, or Ollama, while vector and reranking models are built in. The open-source edition covers one wiki site, 300 documents, and one admin, and its console and documentation are in Chinese. Running on a dedicated VPS on RepoCloud with guaranteed CPU, RAM, and SSD, full root SSH access, and a browser serial console. AGPL-3.0 licensed.

Sage Wiki turns a pile of unstructured documents into a fully interlinked, searchable wiki by running them through a five-pass LLM compiler pipeline. Inspired by Andrej Karpathy's vision of LLM-compiled knowledge bases, the pipeline processes source files through diff detection, summarization, concept extraction, image captioning, and cross-reference discovery, with parallel LLM calls and checkpoint/resume for vaults scaling to 100,000+ documents. The typed ontology graph stores entities and relations with BFS traversal, configurable relation types, multilingual synonyms, and a promotion/demotion lifecycle backed by grounding verification and consensus scoring. Multi-format ingestion handles Markdown, PDF, Word, Excel, PowerPoint, EPUB, email, CSV, images, and code files without manual tagging. LLM provider support spans Anthropic, OpenAI, Gemini, Ollama, and any OpenAI-compatible API, with per-pass model routing enabling cost optimization by assigning cheaper models to simpler tasks. The built-in MCP server exposes 17 tools over SSE transport for integration with Claude, Cursor, and any MCP-compatible agent, while native Obsidian vault overlay ensures existing note workflows remain undisrupted. Team deployment supports Git-synced shared wikis, centralized server access, and hub federation across multiple projects. Ships as a single Go binary with Docker Compose multi-arch images serving the web UI on port 3333. Running on a dedicated VPS on RepoCloud with guaranteed CPU, RAM, and SSD, full root SSH access, and a browser serial console. MIT licensed.

Atomic transforms collections of personal Markdown notes into an AI-augmented knowledge graph by breaking documents down into semantically linked conceptual units. Users capture thoughts, research excerpts, and web clippings as modular notes that the system automatically chunks, embeds, and categorizes with hierarchical tags. An interactive force-directed canvas maps out the entire knowledge base, positioning related ideas closer together based on embedding cosine similarity rather than manual folder hierarchies. Built-in vector search queries across text embeddings directly within SQLite, retrieving precise contextual snippets in response to natural language prompts. The automated wiki engine synthesizes disparate notes into comprehensive reference articles equipped with verifiable inline citations back to original source materials. Integrated conversational agents leverage retrieved knowledge context to answer research questions, surface contradictions across past entries, and draft structured daily briefings. External AI tools can read, search, and update stored knowledge through an embedded Model Context Protocol server endpoint. Running on a dedicated VPS on RepoCloud with guaranteed CPU, RAM, and SSD, full root SSH access, and a browser serial console. MIT licensed.

Kotaemon is a document QA platform that combines advanced RAG techniques with a clean Gradio-based web interface for chatting with your documents. Built by Cinnamon, the Python backend supports any LLM provider including OpenAI, Azure OpenAI, Cohere, Groq, and local models via Ollama and llama-cpp-python, with a model management panel for configuring LLM and embedding providers from the UI. The default hybrid RAG pipeline combines full-text keyword retrieval with vector similarity search and applies re-ranking to ensure optimal result quality, while multi-modal document parsing extracts content from tables and figures alongside text. Advanced citations link every answer to specific source passages with relevance scores, viewable directly in the built-in PDF viewer with highlighted text spans. GraphRAG indexing via NanoGraphRAG, LightRAG, or Microsoft GraphRAG builds knowledge graphs from document collections for relationship-aware retrieval. Agent-based reasoning supports question decomposition for multi-hop queries using ReAct and ReWOO strategies. Multi-user authentication organizes documents into private and public collections with sharing and collaboration features. The platform supports Docker deployment in lite, full, and Ollama-bundled variants, runs on port 7860, and stores application data in a persistent volume. MCP tool integration enables external system connections for extended retrieval capabilities. On RepoCloud, deploy Kotaemon on a dedicated VPS with Docker, root SSH access, and complete control over your document AI infrastructure, all under the Apache 2.0 license.

Plain chunk retrieval hands an LLM disconnected excerpts; LightRAG builds a knowledge graph from your documents so answers can join facts spread across many files. Ask about one named person, product, or clause and local mode pulls its details. Ask for themes across the whole library and global mode follows the links between entities. Hybrid blends the two, naive falls back to plain chunk search, and mix combines all three. Mix is the default. Upload text, Markdown, PDF, Word, PowerPoint, and Excel files; MinerU, Docling, or the native parser can extract images, tables, and formulas. The admin console manages documents, explores the graph visually, and debugs queries, while a query-only workspace page gives everyday colleagues a clean chat screen that works on phones. A REST API covers indexing and queries, and an Ollama-compatible endpoint lets chat front ends such as Open WebUI use the knowledge base as a model. New files merge into the existing graph without a full reindex, and deleting a document rebuilds only the entities and relationships it touched from cached results. Separate model roles let an inexpensive model extract entities while a stronger one writes answers. An API key or accounts protect the server, and named workspaces keep several knowledge bases apart. Pair it with local Ollama models and no document text leaves the server. Running on a dedicated VPS on RepoCloud with guaranteed CPU, RAM, and SSD, full root SSH access, and a browser serial console. MIT licensed.

Your documents change every day, and your RAG answers should change with them: Serviette keeps a chat and REST API continuously in sync with the files you point it at, no re-indexing jobs to remember. Point it at a local folder, Google Drive, S3 or MinIO bucket, SharePoint library, or even an FTP or WebDAV share, and edits, additions, and deletions flow into the index in real time. One YAML file, or the interactive wizard, chooses among eight vector databases, from embedded DuckDB with zero setup to pgvector, Qdrant, Milvus, Chroma, Weaviate, Pinecone, or MongoDB Atlas. Text, Office files, PDFs with tables, and scanned images are parsed and answerable by default, with audio and video joining when you add the keys. Embeddings can run fully locally with no credentials, and keyless answers simply quote the retrieved passages with their sources. The indexer and the stateless server scale independently, the server shards across workers with one config line, and both a ChatGPT-style web chat and a versioned /api/v1 retrieval API answer on the same port. A free license key from Pathway activates the engine, and benchmarks cover corpora up to 50 GB of text. Running on a dedicated VPS on RepoCloud with guaranteed CPU, RAM, and SSD, full root SSH access, and a browser serial console. MIT licensed.

Transforming fragmented research notes, daily technical logs, and project documentation into an interconnected knowledge base is what NoteDiscovery delivers for privacy-conscious teams and researchers. Writers compose rich documents using a dual-pane editor that renders MathJax equations, interactive task lists, and dynamic Mermaid sequence diagrams side by side with raw text. The interactive knowledge graph maps semantic relationships across notebooks, allowing researchers to explore backlinks, uncover hidden topical connections, and navigate complex idea webs visually. Team members sketch architecture diagrams and wireframes directly inside note canvases using the integrated drawing tool, saving revisions as embedded image layers without external editors. The platform organizes thoughts through flexible tag hierarchies, nested folder trees, and reusable document templates equipped with automatic date and variable substitutions. Autonomous coding assistants and language models query documentation, create structured meeting summaries, and update project indexes directly through the native Model Context Protocol server. Built-in export tools convert notebook collections into standalone HTML packages, printable documents, or portable Markdown archives for offline archiving. Running on a dedicated VPS on RepoCloud with guaranteed CPU, RAM, and SSD, full root SSH access, and a browser serial console. MIT licensed.

Backed by over 45,000 GitHub stars and described as the tool that replaces Notion, Evernote, and Anki in a single Docker container, SiYuan is the privacy-first knowledge management system where every paragraph, heading, and list item is a uniquely addressable content block. The block-level architecture enables bidirectional links, transclusion embeds, and SQL query blocks that dynamically aggregate content across your entire workspace, while the knowledge graph visualization maps relationship networks between documents and blocks. Built-in databases support table views with relation and rollup columns, filter composition, sorting, and template-based calculations for structured data management alongside freeform notes. The FSRS spaced repetition engine turns any content block into a flashcard with scientifically calibrated review scheduling, eliminating the need for separate memorization tools. AI integration connects to OpenAI-compatible APIs for writing assistance, translation, summarization, and Q&A chat, with semantic search using embeddings and reranking for intelligent content retrieval. The Bazaar community marketplace delivers plugins, themes, templates, and widgets through a managed extension system with TypeScript plugin APIs. End-to-end encrypted synchronization works across S3-compatible storage, WebDAV servers, or SiYuan's own cloud service, while Tesseract OCR extracts searchable text from images and the web clipper captures pages from Chrome, Edge, and Firefox. Export targets include Markdown with assets, PDF, Word, and HTML. Running on a dedicated VPS on RepoCloud with guaranteed CPU, RAM, and SSD, full root SSH access, and a browser serial console. AGPL-3.0 licensed.

Large language models get a polished front end that can run fully offline: Open WebUI is the self-hosted front end of choice. It talks to local model runners, primarily Ollama, and to any OpenAI-compatible API, so LM Studio, vLLM, Groq, Mistral, OpenRouter, and cloud providers all plug into the same chat interface and can be mixed per conversation. RAG is built in: upload files to knowledge bases or reference them in chat with the # command, backed by a choice of nine vector databases (ChromaDB and PGVector officially maintained) and multiple extraction engines including Tika and Docling, with hybrid BM25-plus-vector search and cross-encoder reranking. Web search results from providers like SearXNG, Brave, and Tavily inject directly into conversations. Extensibility comes from Python tools and functions that run inside the chat, a Pipelines plugin framework, and native MCP support. Multi-user features include RBAC, SSO, and group permissions, and the instance itself exposes an OpenAI-compatible API your own apps can call.

A question goes in; a cited, long-form report comes out - GPT Researcher is an open-source autonomous research agent. A planner agent decomposes the query into sub-questions, execution agents crawl 20+ web sources in parallel with JavaScript-enabled scraping, and a publisher aggregates findings into a 2,000+ word report with inline citations, exportable to PDF, Word, and Markdown. The Deep Research mode extends this recursively: each result yields follow-up questions that are explored to configurable breadth and depth in a tree pattern, while accumulated learnings, citations, and visited URLs are shared across branches. It also researches local documents (PDF, CSV, Word) alongside the web. LLM and search providers are pluggable, including OpenAI, Anthropic, Google, DeepSeek, and Ollama for models, and Tavily, Google, Bing, DuckDuckGo, and SearXNG for retrieval. It ships as a Python package, a FastAPI server with web frontend, a Docker image, and an MCP server for use inside Claude or Cursor. MIT-licensed.

Team and product documentation on a fast Vue frontend with PostgreSQL storage: Wiki.js is a Node.js wiki engine. Its distinguishing trait is per-page editor choice: authors pick Markdown with live preview, a WYSIWYG visual builder for non-technical writers, or raw HTML, page by page. Native Git synchronization commits every page change to GitHub, GitLab, Bitbucket, Azure DevOps, or any Git remote - bi-directionally, so edits made in the repository flow back into the wiki - giving documentation version-controlled backup for free. Authentication coverage is among the broadest of any self-hosted wiki: local accounts with self-registration, social login via Google, GitHub, Discord, and Slack, and enterprise SSO through LDAP/Active Directory, SAML, CAS, Auth0, Okta, Azure AD, Keycloak, and generic OAuth2/OIDC, with optional MFA. Built-in full-text search runs on PostgreSQL with zero setup, and external engines like Algolia or Solr can substitute. Page history with visual version comparison, granular group-based permissions per path, nested navigation menus, 50+ integration modules, and full localization round it out. AGPLv3-licensed with a 28k-star community.